{"schema_version":"1.0","hypothesis_id":33581,"triple":{"drug":"resveratrol","drug_canonical":"resveratrol","mediator":"Nrf2","mediator_canonical":"NRF2","outcome":"chemoresistance","outcome_canonical":null},"domain":{"domain":"cross_domain","source":"inflammatory_bowel_disease","target":"pancreatic_cancer"},"provenance_completeness":"partial_backfill","completeness_notes":"Backfilled retroactively from DB state on 2026-05-13. The pipeline_run this row references was created by the backfill script, not by the actual generation orchestrator. Source papers, claims, scoring, and embedding config are recovered; generation-time metadata (exact git commit at gen time, host, exact command) is not recoverable.","source_papers":[{"doi":"10.3892/mmr.2024.13201","pmid":"38488031","year":2024,"roles":["drug_mediator"],"title":"Resveratrol ameliorates ulcerative colitis by upregulating Nrf2/HO‑1 pathway activity: Integrating animal experiments and network pharmacology","journal":"Mol Med Rep","work_id":270883,"publication_date":"2024-03-14"},{"doi":"10.1158/0008-5472.can-19-1363","pmid":"31911550","year":2020,"roles":["mediator_outcome"],"title":"Undermining Glutaminolysis Bolsters Chemotherapy While NRF2 Promotes Chemoresistance in KRAS-Driven Pancreatic Cancers","journal":"Cancer Res","work_id":70170,"publication_date":"2020-01-07"},{"doi":"10.1016/j.redox.2019.101131","pmid":"30735911","year":2019,"roles":["mediator_outcome"],"title":"Digoxin sensitizes gemcitabine-resistant pancreatic cancer cells to gemcitabine via inhibiting Nrf2 signaling pathway","journal":"Redox Biol","work_id":71346,"publication_date":"2019-01-30"}],"source_paper_count":3,"extracted_claims":[{"side":"drug_mediator","object":"Nrf2","context":"in network pharmacology and molecular docking studies","subject":"Resveratrol","work_id":270883,"claim_id":224369,"polarity":"positive","predicate":"binds_to","confidence":0.85,"extraction_run_id":31},{"side":"mediator_outcome","object":"chemoresistance","context":"in KRAS-driven pancreatic cancers","subject":"NRF2","work_id":70170,"claim_id":59703,"polarity":"positive","predicate":"causes","confidence":0.9,"extraction_run_id":17},{"side":"mediator_outcome","object":"chemoresistance","context":"in pancreatic ductal adenocarcinoma","subject":"Nrf2","work_id":71346,"claim_id":62701,"polarity":"positive","predicate":"associated_with","confidence":0.8,"extraction_run_id":17}],"extracted_claim_count":3,"extraction":{"model":"deepseek-v4-flash","model_source":"configured","prompt_version":"v1_2026_05_07","run_ids":[17,31]},"bridge":{"a_to_b_predicate":"binds_to","b_to_c_predicate":"causes","a_to_b_evidence_count":1,"b_to_c_evidence_count":2,"edge_support_log_ab":0.6931471805599453,"edge_support_log_bc":1.0986122886681098,"novelty_factor":1.0,"direct_a_to_c_count":0},"embedding":{"model":"bge-m3","dim":1024,"max_length":8192,"similarity_scores":{}},"scoring":{"method":"swanson_abc_log_evidence_with_novelty_penalty","formula":"score = min((log(ab+1) + log(bc+1)) * novelty / 10, 1.0); novelty = 1.0 if direct==0 else 0.7 / (direct+1)","score_raw":0.1791759469228055,"score":0.26876392038420827,"quality_tier":"mid","quality_reason":null},"pipeline_run":{"id":4,"run_uuid":"eb8b7730-d92e-4cd5-95dd-95f6c5d62cc2","command":"scripts/backfill_provenance_v2.py:v2_2026_05_12","status":"completed","git_commit":"9996ffaa56e9b7cd5f677bd8203624c2c18aa000","host":"MacBook-Pro-Daniel96.local","started_at":"2026-05-12T21:35:53.363326+00:00","ended_at":"2026-05-12T21:43:41.903387+00:00","notes":"Retroactive provenance backfill on 2026-05-13 for snapshot v2_2026_05_12. Synthetic pipeline_runs row — original generation run records are lost (pre-date provenance schema). All recoverable fields populated from current DB state (claims, works, repurposing_hypotheses); pipeline_run record is synthetic, hence completeness='partial_backfill'.\nBackfilled 1,618 provenance rows. Source papers: avg=3.73, zero=0. Claims matched: avg=4.09, zero=0.\nRefreshed 1,618 provenance rows. Source papers: avg=3.73, zero=0. Claims matched: avg=4.09, zero=0.\nRefreshed 1,618 provenance rows. Source papers: avg=3.73, zero=0. Claims matched: avg=4.09, zero=0.","domains":["als","alzheimer","depression","epilepsy","glioblastoma","inflammatory_bowel_disease","multiple_sclerosis","pancreatic_cancer","rheumatoid_arthritis","type_2_diabetes"]},"generated_at":"2026-05-12T21:43:40.945575+00:00"}